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Pasteurella multocida isolates

Missing metadata are labelled N for text and 0 for integers

Updated 1 April 2022

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Sequence bin for UBA9365

Contig summary statistics

Contigs
55
Total length
2,158,847
Minimum length
2,763
Maximum length
189,840
Mean length
39,252
N50 contig number
12
N50 length (L50)
59,972
N90 contig number
33
N90 length (L90)
22,008
N95 contig number
40
N95 length (L95)
13,307

Contig size distribution

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionEMBL formatArtemis
1669 DMUM01000050.1 189840 TPA_asm: Pasteurella multocida isolate UBA9365 contig_34, whole genome shotgun sequence
1630DMUM01000030.1160865TPA_asm: Pasteurella multocida isolate UBA9365 contig_6, whole genome shotgun sequencecapA 8172184618 ←
1625 DMUM01000033.1 114903 TPA_asm: Pasteurella multocida isolate UBA9365 contig_14, whole genome shotgun sequence
1644 DMUM01000041.1 105859 TPA_asm: Pasteurella multocida isolate UBA9365 contig_30, whole genome shotgun sequence
1649 DMUM01000043.1 101893 TPA_asm: Pasteurella multocida isolate UBA9365 contig_18, whole genome shotgun sequence
1671 DMUM01000026.1 74138 TPA_asm: Pasteurella multocida isolate UBA9365 contig_1, whole genome shotgun sequence
1627 DMUM01000008.1 72797 TPA_asm: Pasteurella multocida isolate UBA9365 contig_22, whole genome shotgun sequence
1652DMUM01000045.168310TPA_asm: Pasteurella multocida isolate UBA9365 contig_51, whole genome shotgun sequenceLPSgroup 3 3081331655 ←
1624 DMUM01000015.1 63376 TPA_asm: Pasteurella multocida isolate UBA9365 contig_63, whole genome shotgun sequence
1675 DMUM01000002.1 61030 TPA_asm: Pasteurella multocida isolate UBA9365 contig_33, whole genome shotgun sequence
1657 DMUM01000027.1 60526 TPA_asm: Pasteurella multocida isolate UBA9365 contig_3, whole genome shotgun sequence
1653 DMUM01000039.1 59972 TPA_asm: Pasteurella multocida isolate UBA9365 contig_32, whole genome shotgun sequence
1676 DMUM01000007.1 57168 TPA_asm: Pasteurella multocida isolate UBA9365 contig_47, whole genome shotgun sequence
1634 DMUM01000005.1 56572 TPA_asm: Pasteurella multocida isolate UBA9365 contig_29, whole genome shotgun sequence
1661 DMUM01000035.1 55185 TPA_asm: Pasteurella multocida isolate UBA9365 contig_36, whole genome shotgun sequence
1632 DMUM01000040.1 51082 TPA_asm: Pasteurella multocida isolate UBA9365 contig_17, whole genome shotgun sequence
1663 DMUM01000031.1 49784 TPA_asm: Pasteurella multocida isolate UBA9365 contig_9, whole genome shotgun sequence
1641 DMUM01000044.1 47631 TPA_asm: Pasteurella multocida isolate UBA9365 contig_56, whole genome shotgun sequence
1648 DMUM01000023.1 41714 TPA_asm: Pasteurella multocida isolate UBA9365 contig_10, whole genome shotgun sequence
1628 DMUM01000036.1 41427 TPA_asm: Pasteurella multocida isolate UBA9365 contig_35, whole genome shotgun sequence
1639 DMUM01000018.1 39308 TPA_asm: Pasteurella multocida isolate UBA9365 contig_68, whole genome shotgun sequence
1660 DMUM01000034.1 39277 TPA_asm: Pasteurella multocida isolate UBA9365 contig_11, whole genome shotgun sequence
1651 DMUM01000052.1 38847 TPA_asm: Pasteurella multocida isolate UBA9365 contig_21, whole genome shotgun sequence
1642 DMUM01000004.1 38109 TPA_asm: Pasteurella multocida isolate UBA9365 contig_28, whole genome shotgun sequence
1673 DMUM01000012.1 36105 TPA_asm: Pasteurella multocida isolate UBA9365 contig_27, whole genome shotgun sequence
1633 DMUM01000037.1 35747 TPA_asm: Pasteurella multocida isolate UBA9365 contig_12, whole genome shotgun sequence
1667 DMUM01000006.1 32945 TPA_asm: Pasteurella multocida isolate UBA9365 contig_20, whole genome shotgun sequence
1643 DMUM01000009.1 29762 TPA_asm: Pasteurella multocida isolate UBA9365 contig_23, whole genome shotgun sequence
1626 DMUM01000017.1 28450 TPA_asm: Pasteurella multocida isolate UBA9365 contig_83, whole genome shotgun sequence
1664 DMUM01000046.1 27107 TPA_asm: Pasteurella multocida isolate UBA9365 contig_53, whole genome shotgun sequence
1668 DMUM01000032.1 24362 TPA_asm: Pasteurella multocida isolate UBA9365 contig_8, whole genome shotgun sequence
1659 DMUM01000038.1 22029 TPA_asm: Pasteurella multocida isolate UBA9365 contig_59, whole genome shotgun sequence
1640 DMUM01000010.1 22008 TPA_asm: Pasteurella multocida isolate UBA9365 contig_24, whole genome shotgun sequence
1631 DMUM01000028.1 21700 TPA_asm: Pasteurella multocida isolate UBA9365 contig_2, whole genome shotgun sequence
1622 DMUM01000049.1 17951 TPA_asm: Pasteurella multocida isolate UBA9365 contig_100, whole genome shotgun sequence
1638 DMUM01000001.1 16704 TPA_asm: Pasteurella multocida isolate UBA9365 contig_42, whole genome shotgun sequence
1674 DMUM01000011.1 15359 TPA_asm: Pasteurella multocida isolate UBA9365 contig_43, whole genome shotgun sequence
1654 DMUM01000029.1 14790 TPA_asm: Pasteurella multocida isolate UBA9365 contig_4, whole genome shotgun sequence
1666 DMUM01000021.1 14333 TPA_asm: Pasteurella multocida isolate UBA9365 contig_84, whole genome shotgun sequence
1658 DMUM01000042.1 13307 TPA_asm: Pasteurella multocida isolate UBA9365 contig_55, whole genome shotgun sequence
1647 DMUM01000048.1 10669 TPA_asm: Pasteurella multocida isolate UBA9365 contig_103, whole genome shotgun sequence
1650 DMUM01000019.1 9411 TPA_asm: Pasteurella multocida isolate UBA9365 contig_86, whole genome shotgun sequence
1646 DMUM01000003.1 9382 TPA_asm: Pasteurella multocida isolate UBA9365 contig_127, whole genome shotgun sequence
1623 DMUM01000047.1 8813 TPA_asm: Pasteurella multocida isolate UBA9365 contig_99, whole genome shotgun sequence
1645 DMUM01000022.1 8407 TPA_asm: Pasteurella multocida isolate UBA9365 contig_37, whole genome shotgun sequence
1636 DMUM01000016.1 8131 TPA_asm: Pasteurella multocida isolate UBA9365 contig_82, whole genome shotgun sequence
1670 DMUM01000024.1 5924 TPA_asm: Pasteurella multocida isolate UBA9365 contig_13, whole genome shotgun sequence
1655 DMUM01000055.1 5869 TPA_asm: Pasteurella multocida isolate UBA9365 contig_96, whole genome shotgun sequence
1629 DMUM01000053.1 5262 TPA_asm: Pasteurella multocida isolate UBA9365 contig_91, whole genome shotgun sequence
1672 DMUM01000014.1 5157 TPA_asm: Pasteurella multocida isolate UBA9365 contig_113, whole genome shotgun sequence
1637 DMUM01000025.1 5092 TPA_asm: Pasteurella multocida isolate UBA9365 contig_184, whole genome shotgun sequence
1662 DMUM01000013.1 4845 TPA_asm: Pasteurella multocida isolate UBA9365 contig_65, whole genome shotgun sequence
1665 DMUM01000020.1 4079 TPA_asm: Pasteurella multocida isolate UBA9365 contig_69, whole genome shotgun sequence
1635 DMUM01000054.1 2771 TPA_asm: Pasteurella multocida isolate UBA9365 contig_92, whole genome shotgun sequence
1656 DMUM01000051.1 2763 TPA_asm: Pasteurella multocida isolate UBA9365 contig_285, whole genome shotgun sequence