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Pasteurella multocida isolates

Missing metadata are labelled N for text and 0 for integers

Updated 1 April 2022

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Sequence bin for SKN1

Contig summary statistics

Contigs
107
Total length
2,329,255
Minimum length
1,099
Maximum length
158,649
Mean length
21,769
N50 contig number
16
N50 length (L50)
41,830
N90 contig number
59
N90 length (L90)
10,821
N95 contig number
72
N95 length (L95)
6,586

Contig size distribution

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionEMBL formatArtemis
1526 NIOC01000001.1 158649 Pasteurella multocida strain SKN1 NODE_1_length_158649_cov_12.018_ID_1, whole genome shotgun sequence
1574 NIOC01000002.1 123166 Pasteurella multocida strain SKN1 NODE_2_length_123166_cov_15.0268_ID_3, whole genome shotgun sequence
1520 NIOC01000003.1 115093 Pasteurella multocida strain SKN1 NODE_3_length_115093_cov_11.1752_ID_5, whole genome shotgun sequence
1554 NIOC01000004.1 79383 Pasteurella multocida strain SKN1 NODE_4_length_79383_cov_11.2241_ID_7, whole genome shotgun sequence
1552 NIOC01000005.1 71451 Pasteurella multocida strain SKN1 NODE_5_length_71451_cov_13.2725_ID_9, whole genome shotgun sequence
1605 NIOC01000006.1 71141 Pasteurella multocida strain SKN1 NODE_6_length_71141_cov_10.0376_ID_11, whole genome shotgun sequence
1610 NIOC01000007.1 69880 Pasteurella multocida strain SKN1 NODE_7_length_69880_cov_9.6405_ID_13, whole genome shotgun sequence
1603 NIOC01000008.1 65490 Pasteurella multocida strain SKN1 NODE_8_length_65490_cov_10.4411_ID_15, whole genome shotgun sequence
1513 NIOC01000009.1 63709 Pasteurella multocida strain SKN1 NODE_9_length_63709_cov_15.0518_ID_17, whole genome shotgun sequence
1563 NIOC01000010.1 62431 Pasteurella multocida strain SKN1 NODE_10_length_62431_cov_14.5182_ID_19, whole genome shotgun sequence
1550 NIOC01000011.1 59962 Pasteurella multocida strain SKN1 NODE_11_length_59962_cov_10.284_ID_21, whole genome shotgun sequence
1512 NIOC01000012.1 56421 Pasteurella multocida strain SKN1 NODE_12_length_56421_cov_15.3001_ID_23, whole genome shotgun sequence
1571 NIOC01000013.1 44535 Pasteurella multocida strain SKN1 NODE_13_length_44535_cov_11.2548_ID_25, whole genome shotgun sequence
1599 NIOC01000014.1 44048 Pasteurella multocida strain SKN1 NODE_14_length_44048_cov_11.3181_ID_27, whole genome shotgun sequence
1509 NIOC01000015.1 41896 Pasteurella multocida strain SKN1 NODE_15_length_41896_cov_9.35268_ID_29, whole genome shotgun sequence
1568 NIOC01000016.1 41830 Pasteurella multocida strain SKN1 NODE_16_length_41830_cov_11.3098_ID_31, whole genome shotgun sequence
1567 NIOC01000017.1 39085 Pasteurella multocida strain SKN1 NODE_17_length_39085_cov_14.07_ID_33, whole genome shotgun sequence
1545 NIOC01000018.1 38390 Pasteurella multocida strain SKN1 NODE_18_length_38390_cov_10.027_ID_35, whole genome shotgun sequence
1555 NIOC01000019.1 36919 Pasteurella multocida strain SKN1 NODE_19_length_36919_cov_9.97496_ID_37, whole genome shotgun sequence
1600 NIOC01000020.1 36851 Pasteurella multocida strain SKN1 NODE_20_length_36851_cov_12.0099_ID_39, whole genome shotgun sequence
1533 NIOC01000021.1 35311 Pasteurella multocida strain SKN1 NODE_21_length_35311_cov_13.7756_ID_41, whole genome shotgun sequence
1522 NIOC01000022.1 34291 Pasteurella multocida strain SKN1 NODE_22_length_34291_cov_11.9476_ID_43, whole genome shotgun sequence
1608 NIOC01000023.1 33125 Pasteurella multocida strain SKN1 NODE_23_length_33125_cov_10.3569_ID_45, whole genome shotgun sequence
1561NIOC01000024.131601Pasteurella multocida strain SKN1 NODE_24_length_31601_cov_11.8631_ID_47, whole genome shotgun sequenceLPSgroup 3 26673509 ←
1607 NIOC01000025.1 30293 Pasteurella multocida strain SKN1 NODE_25_length_30293_cov_9.94658_ID_49, whole genome shotgun sequence
1604 NIOC01000026.1 30228 Pasteurella multocida strain SKN1 NODE_26_length_30228_cov_13.3913_ID_51, whole genome shotgun sequence
1529 NIOC01000027.1 29883 Pasteurella multocida strain SKN1 NODE_27_length_29883_cov_10.0839_ID_53, whole genome shotgun sequence
1606 NIOC01000028.1 27340 Pasteurella multocida strain SKN1 NODE_28_length_27340_cov_10.8352_ID_55, whole genome shotgun sequence
1530NIOC01000029.126392Pasteurella multocida strain SKN1 NODE_29_length_26392_cov_8.61416_ID_57, whole genome shotgun sequencecapA 1714120062 →
1613 NIOC01000030.1 23297 Pasteurella multocida strain SKN1 NODE_30_length_23297_cov_14.0968_ID_59, whole genome shotgun sequence
1518 NIOC01000031.1 23103 Pasteurella multocida strain SKN1 NODE_31_length_23103_cov_11.6794_ID_61, whole genome shotgun sequence
1612 NIOC01000032.1 22559 Pasteurella multocida strain SKN1 NODE_32_length_22559_cov_10.2903_ID_63, whole genome shotgun sequence
1570 NIOC01000033.1 22246 Pasteurella multocida strain SKN1 NODE_33_length_22246_cov_9.63855_ID_65, whole genome shotgun sequence
1587 NIOC01000034.1 21808 Pasteurella multocida strain SKN1 NODE_34_length_21808_cov_11.5562_ID_67, whole genome shotgun sequence
1588 NIOC01000035.1 21314 Pasteurella multocida strain SKN1 NODE_35_length_21314_cov_14.2693_ID_69, whole genome shotgun sequence
1542 NIOC01000036.1 19506 Pasteurella multocida strain SKN1 NODE_36_length_19506_cov_9.91565_ID_71, whole genome shotgun sequence
1598 NIOC01000037.1 19435 Pasteurella multocida strain SKN1 NODE_37_length_19435_cov_13.3351_ID_73, whole genome shotgun sequence
1541 NIOC01000038.1 19194 Pasteurella multocida strain SKN1 NODE_38_length_19194_cov_12.6684_ID_75, whole genome shotgun sequence
1510 NIOC01000039.1 18798 Pasteurella multocida strain SKN1 NODE_39_length_18798_cov_15.4104_ID_77, whole genome shotgun sequence
1593 NIOC01000040.1 18763 Pasteurella multocida strain SKN1 NODE_40_length_18763_cov_12.0609_ID_79, whole genome shotgun sequence
1511 NIOC01000041.1 18541 Pasteurella multocida strain SKN1 NODE_41_length_18541_cov_13.01_ID_81, whole genome shotgun sequence
1551 NIOC01000042.1 17882 Pasteurella multocida strain SKN1 NODE_42_length_17882_cov_13.7162_ID_83, whole genome shotgun sequence
1569 NIOC01000043.1 17095 Pasteurella multocida strain SKN1 NODE_43_length_17095_cov_11.4547_ID_85, whole genome shotgun sequence
1614 NIOC01000044.1 17072 Pasteurella multocida strain SKN1 NODE_44_length_17072_cov_10.9005_ID_87, whole genome shotgun sequence
1601 NIOC01000045.1 17022 Pasteurella multocida strain SKN1 NODE_45_length_17022_cov_12.8348_ID_89, whole genome shotgun sequence
1582 NIOC01000046.1 16091 Pasteurella multocida strain SKN1 NODE_46_length_16091_cov_14.7581_ID_91, whole genome shotgun sequence
1528 NIOC01000047.1 16072 Pasteurella multocida strain SKN1 NODE_47_length_16072_cov_12.5662_ID_93, whole genome shotgun sequence
1521 NIOC01000048.1 15438 Pasteurella multocida strain SKN1 NODE_48_length_15438_cov_12.7793_ID_95, whole genome shotgun sequence
1559 NIOC01000049.1 14719 Pasteurella multocida strain SKN1 NODE_49_length_14719_cov_10.4272_ID_97, whole genome shotgun sequence
1580 NIOC01000050.1 14511 Pasteurella multocida strain SKN1 NODE_50_length_14511_cov_10.4981_ID_99, whole genome shotgun sequence
1615 NIOC01000051.1 14227 Pasteurella multocida strain SKN1 NODE_51_length_14227_cov_13.8601_ID_101, whole genome shotgun sequence
1517 NIOC01000052.1 13606 Pasteurella multocida strain SKN1 NODE_52_length_13606_cov_15.0022_ID_103, whole genome shotgun sequence
1572 NIOC01000053.1 12424 Pasteurella multocida strain SKN1 NODE_53_length_12424_cov_14.2199_ID_105, whole genome shotgun sequence
1590 NIOC01000054.1 12317 Pasteurella multocida strain SKN1 NODE_54_length_12317_cov_9.86078_ID_107, whole genome shotgun sequence
1546 NIOC01000055.1 11580 Pasteurella multocida strain SKN1 NODE_55_length_11580_cov_12.9222_ID_109, whole genome shotgun sequence
1540 NIOC01000056.1 11491 Pasteurella multocida strain SKN1 NODE_56_length_11491_cov_10.1375_ID_111, whole genome shotgun sequence
1564 NIOC01000057.1 11018 Pasteurella multocida strain SKN1 NODE_57_length_11018_cov_15.7538_ID_113, whole genome shotgun sequence
1573 NIOC01000058.1 10864 Pasteurella multocida strain SKN1 NODE_58_length_10864_cov_11.5276_ID_115, whole genome shotgun sequence
1597 NIOC01000059.1 10821 Pasteurella multocida strain SKN1 NODE_59_length_10821_cov_10.3535_ID_117, whole genome shotgun sequence
1548 NIOC01000060.1 10657 Pasteurella multocida strain SKN1 NODE_60_length_10657_cov_13.1989_ID_119, whole genome shotgun sequence
1583 NIOC01000061.1 10315 Pasteurella multocida strain SKN1 NODE_61_length_10315_cov_9.95145_ID_121, whole genome shotgun sequence
1602 NIOC01000062.1 9600 Pasteurella multocida strain SKN1 NODE_62_length_9600_cov_14.3735_ID_123, whole genome shotgun sequence
1534 NIOC01000063.1 9401 Pasteurella multocida strain SKN1 NODE_63_length_9401_cov_11.9622_ID_125, whole genome shotgun sequence
1575 NIOC01000064.1 9215 Pasteurella multocida strain SKN1 NODE_64_length_9215_cov_10.8157_ID_127, whole genome shotgun sequence
1514 NIOC01000065.1 9158 Pasteurella multocida strain SKN1 NODE_65_length_9158_cov_11.797_ID_129, whole genome shotgun sequence
1544 NIOC01000066.1 8765 Pasteurella multocida strain SKN1 NODE_66_length_8765_cov_10.0294_ID_131, whole genome shotgun sequence
1539 NIOC01000067.1 8401 Pasteurella multocida strain SKN1 NODE_67_length_8401_cov_12.8468_ID_133, whole genome shotgun sequence
1515 NIOC01000068.1 8014 Pasteurella multocida strain SKN1 NODE_68_length_8014_cov_11.2263_ID_135, whole genome shotgun sequence
1537 NIOC01000069.1 7546 Pasteurella multocida strain SKN1 NODE_69_length_7546_cov_30.8928_ID_137, whole genome shotgun sequence
1594 NIOC01000070.1 7260 Pasteurella multocida strain SKN1 NODE_70_length_7260_cov_15.8718_ID_139, whole genome shotgun sequence
1532 NIOC01000071.1 7139 Pasteurella multocida strain SKN1 NODE_71_length_7139_cov_12.3368_ID_141, whole genome shotgun sequence
1543 NIOC01000072.1 6586 Pasteurella multocida strain SKN1 NODE_72_length_6586_cov_8.47002_ID_143, whole genome shotgun sequence
1562 NIOC01000073.1 6309 Pasteurella multocida strain SKN1 NODE_73_length_6309_cov_13.671_ID_145, whole genome shotgun sequence
1538 NIOC01000074.1 5930 Pasteurella multocida strain SKN1 NODE_74_length_5930_cov_12.8047_ID_147, whole genome shotgun sequence
1557 NIOC01000075.1 5818 Pasteurella multocida strain SKN1 NODE_75_length_5818_cov_26.2509_ID_149, whole genome shotgun sequence
1584 NIOC01000076.1 5510 Pasteurella multocida strain SKN1 NODE_76_length_5510_cov_11.2495_ID_151, whole genome shotgun sequence
1549 NIOC01000077.1 5439 Pasteurella multocida strain SKN1 NODE_77_length_5439_cov_26.3096_ID_153, whole genome shotgun sequence
1591 NIOC01000078.1 5294 Pasteurella multocida strain SKN1 NODE_78_length_5294_cov_20.9663_ID_155, whole genome shotgun sequence
1566 NIOC01000079.1 5194 Pasteurella multocida strain SKN1 NODE_79_length_5194_cov_15.0891_ID_157, whole genome shotgun sequence
1581 NIOC01000080.1 4911 Pasteurella multocida strain SKN1 NODE_80_length_4911_cov_13.8298_ID_159, whole genome shotgun sequence
1536 NIOC01000081.1 4724 Pasteurella multocida strain SKN1 NODE_81_length_4724_cov_9.86141_ID_161, whole genome shotgun sequence
1596 NIOC01000082.1 4289 Pasteurella multocida strain SKN1 NODE_82_length_4289_cov_18.3107_ID_163, whole genome shotgun sequence
1586 NIOC01000083.1 4237 Pasteurella multocida strain SKN1 NODE_83_length_4237_cov_8.90841_ID_165, whole genome shotgun sequence
1577 NIOC01000084.1 4053 Pasteurella multocida strain SKN1 NODE_84_length_4053_cov_9.85736_ID_167, whole genome shotgun sequence
1578 NIOC01000085.1 3995 Pasteurella multocida strain SKN1 NODE_85_length_3995_cov_14.2618_ID_169, whole genome shotgun sequence
1592 NIOC01000086.1 3769 Pasteurella multocida strain SKN1 NODE_86_length_3769_cov_12.7038_ID_171, whole genome shotgun sequence
1589 NIOC01000087.1 3665 Pasteurella multocida strain SKN1 NODE_87_length_3665_cov_8.61105_ID_173, whole genome shotgun sequence
1585 NIOC01000088.1 3615 Pasteurella multocida strain SKN1 NODE_88_length_3615_cov_8.01479_ID_175, whole genome shotgun sequence
1524 NIOC01000089.1 3529 Pasteurella multocida strain SKN1 NODE_89_length_3529_cov_25.0863_ID_177, whole genome shotgun sequence
1527 NIOC01000090.1 3353 Pasteurella multocida strain SKN1 NODE_90_length_3353_cov_10.3832_ID_179, whole genome shotgun sequence
1576 NIOC01000091.1 3344 Pasteurella multocida strain SKN1 NODE_91_length_3344_cov_12.9618_ID_181, whole genome shotgun sequence
1553 NIOC01000092.1 3208 Pasteurella multocida strain SKN1 NODE_92_length_3208_cov_12.4169_ID_183, whole genome shotgun sequence
1611 NIOC01000093.1 2768 Pasteurella multocida strain SKN1 NODE_93_length_2768_cov_7.22818_ID_185, whole genome shotgun sequence
1558 NIOC01000094.1 2634 Pasteurella multocida strain SKN1 NODE_94_length_2634_cov_25.0718_ID_187, whole genome shotgun sequence
1565 NIOC01000095.1 2394 Pasteurella multocida strain SKN1 NODE_95_length_2394_cov_12.3486_ID_189, whole genome shotgun sequence
1535 NIOC01000096.1 2211 Pasteurella multocida strain SKN1 NODE_96_length_2211_cov_8.3892_ID_191, whole genome shotgun sequence
1579 NIOC01000097.1 1801 Pasteurella multocida strain SKN1 NODE_97_length_1801_cov_35.8214_ID_193, whole genome shotgun sequence
1595 NIOC01000098.1 1761 Pasteurella multocida strain SKN1 NODE_98_length_1761_cov_7.72924_ID_195, whole genome shotgun sequence
1531 NIOC01000099.1 1487 Pasteurella multocida strain SKN1 NODE_99_length_1487_cov_32.2111_ID_197, whole genome shotgun sequence
1547 NIOC01000100.1 1414 Pasteurella multocida strain SKN1 NODE_100_length_1414_cov_12.8373_ID_199, whole genome shotgun sequence
1556 NIOC01000101.1 1344 Pasteurella multocida strain SKN1 NODE_101_length_1344_cov_43.9904_ID_201, whole genome shotgun sequence
1523 NIOC01000102.1 1329 Pasteurella multocida strain SKN1 NODE_102_length_1329_cov_97.3073_ID_203, whole genome shotgun sequence
1525 NIOC01000103.1 1309 Pasteurella multocida strain SKN1 NODE_103_length_1309_cov_83.386_ID_205, whole genome shotgun sequence
1609 NIOC01000104.1 1301 Pasteurella multocida strain SKN1 NODE_104_length_1301_cov_5.73794_ID_207, whole genome shotgun sequence
1516 NIOC01000105.1 1294 Pasteurella multocida strain SKN1 NODE_105_length_1294_cov_10.5163_ID_209, whole genome shotgun sequence
1560 NIOC01000106.1 1258 Pasteurella multocida strain SKN1 NODE_106_length_1258_cov_12.5186_ID_211, whole genome shotgun sequence
1519 NIOC01000107.1 1099 Pasteurella multocida strain SKN1 NODE_107_length_1099_cov_14.95_ID_213, whole genome shotgun sequence