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Pasteurella multocida isolates

Missing metadata are labelled N for text and 0 for integers

Updated 1 April 2022

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Sequence bin for B

Contig summary statistics

Contigs
32
Total length
2,311,006
Minimum length
1,146
Maximum length
597,846
Mean length
72,219
N50 contig number
4
N50 length (L50)
172,175
N90 contig number
13
N90 length (L90)
44,804
N95 contig number
17
N95 length (L95)
17,909

Contig size distribution

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionEMBL formatArtemis
1472 LIUP01000026.1 597846 Pasteurella multocida strain B PmB_2, whole genome shotgun sequence
1459 LIUP01000027.1 290283 Pasteurella multocida strain B PmB_3, whole genome shotgun sequence
1480 LIUP01000029.1 266994 Pasteurella multocida strain B PmB_5, whole genome shotgun sequence
1469LIUP01000028.1172175Pasteurella multocida strain B PmB_4, whole genome shotgun sequenceLPSgroup 2 8857189412 →
1470 LIUP01000002.1 149773 Pasteurella multocida strain B PmB_10, whole genome shotgun sequence
1477 LIUP01000008.1 106872 Pasteurella multocida strain B PmB_16, whole genome shotgun sequence
1479 LIUP01000031.1 105657 Pasteurella multocida strain B PmB_8, whole genome shotgun sequence
1478 LIUP01000001.1 93408 Pasteurella multocida strain B PmB_1, whole genome shotgun sequence
1483 LIUP01000007.1 78972 Pasteurella multocida strain B PmB_15, whole genome shotgun sequence
1461 LIUP01000004.1 70249 Pasteurella multocida strain B PmB_12, whole genome shotgun sequence
1482 LIUP01000005.1 62553 Pasteurella multocida strain B PmB_13, whole genome shotgun sequence
1457 LIUP01000025.1 49282 Pasteurella multocida strain B PmB_1777, whole genome shotgun sequence
1464 LIUP01000024.1 44804 Pasteurella multocida strain B PmB_1769, whole genome shotgun sequence
1466 LIUP01000023.1 39163 Pasteurella multocida strain B PmB_1759, whole genome shotgun sequence
1468 LIUP01000006.1 33002 Pasteurella multocida strain B PmB_14, whole genome shotgun sequence
1471 LIUP01000022.1 24467 Pasteurella multocida strain B PmB_1743, whole genome shotgun sequence
1476 LIUP01000021.1 17909 Pasteurella multocida strain B PmB_1733, whole genome shotgun sequence
1465 LIUP01000020.1 17658 Pasteurella multocida strain B PmB_1731, whole genome shotgun sequence
1455 LIUP01000019.1 16623 Pasteurella multocida strain B PmB_1727, whole genome shotgun sequence
1463 LIUP01000003.1 15816 Pasteurella multocida strain B PmB_11, whole genome shotgun sequence
1456 LIUP01000018.1 15024 Pasteurella multocida strain B PmB_1725, whole genome shotgun sequence
1486 LIUP01000017.1 8663 Pasteurella multocida strain B PmB_1709, whole genome shotgun sequence
1481 LIUP01000032.1 7111 Pasteurella multocida strain B PmB_rrna, whole genome shotgun sequence
1460 LIUP01000030.1 6747 Pasteurella multocida strain B PmB_6, whole genome shotgun sequence
1458 LIUP01000016.1 6158 Pasteurella multocida strain B PmB_1699, whole genome shotgun sequence
1467 LIUP01000015.1 3068 Pasteurella multocida strain B PmB_1675, whole genome shotgun sequence
1462 LIUP01000014.1 2663 Pasteurella multocida strain B PmB_1673, whole genome shotgun sequence
1484 LIUP01000013.1 2323 Pasteurella multocida strain B PmB_1669, whole genome shotgun sequence
1473 LIUP01000012.1 1976 Pasteurella multocida strain B PmB_1667, whole genome shotgun sequence
1485 LIUP01000011.1 1385 Pasteurella multocida strain B PmB_1663, whole genome shotgun sequence
1475 LIUP01000010.1 1236 Pasteurella multocida strain B PmB_1661, whole genome shotgun sequence
1474 LIUP01000009.1 1146 Pasteurella multocida strain B PmB_1659, whole genome shotgun sequence