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Pasteurella multocida isolates

Missing metadata are labelled N for text and 0 for integers

Updated 1 April 2022

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Sequence bin for PMS14

Contig summary statistics

Contigs
80
Total length
2,547,427
Minimum length
1,044
Maximum length
268,381
Mean length
31,843
N50 contig number
10
N50 length (L50)
72,128
N90 contig number
32
N90 length (L90)
27,542
N95 contig number
38
N95 length (L95)
11,825

Contig size distribution

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionEMBL formatArtemis
1354 JADMLJ010000001.1 268381 Pasteurella multocida strain PMS 14 NODE_1_length_268381_cov_42.731255, whole genome shotgun sequence
1343 JADMLJ010000002.1 176621 Pasteurella multocida strain PMS 14 NODE_2_length_176621_cov_47.713395, whole genome shotgun sequence
1330 JADMLJ010000003.1 172380 Pasteurella multocida strain PMS 14 NODE_3_length_172380_cov_39.415084, whole genome shotgun sequence
1299 JADMLJ010000004.1 113708 Pasteurella multocida strain PMS 14 NODE_4_length_113708_cov_42.415504, whole genome shotgun sequence
1328 JADMLJ010000005.1 110233 Pasteurella multocida strain PMS 14 NODE_5_length_110233_cov_39.867908, whole genome shotgun sequence
1318JADMLJ010000006.1107914Pasteurella multocida strain PMS 14 NODE_6_length_107914_cov_42.036684, whole genome shotgun sequencecapA 5092453842 ←
1314 JADMLJ010000007.1 96185 Pasteurella multocida strain PMS 14 NODE_7_length_96185_cov_47.863927, whole genome shotgun sequence
1303 JADMLJ010000008.1 91434 Pasteurella multocida strain PMS 14 NODE_8_length_91434_cov_45.440427, whole genome shotgun sequence
1351 JADMLJ010000009.1 77384 Pasteurella multocida strain PMS 14 NODE_9_length_77384_cov_45.746330, whole genome shotgun sequence
1320 JADMLJ010000010.1 72128 Pasteurella multocida strain PMS 14 NODE_10_length_72128_cov_39.495455, whole genome shotgun sequence
1298 JADMLJ010000011.1 71921 Pasteurella multocida strain PMS 14 NODE_11_length_71921_cov_48.331556, whole genome shotgun sequence
1327 JADMLJ010000012.1 71283 Pasteurella multocida strain PMS 14 NODE_12_length_71283_cov_43.912341, whole genome shotgun sequence
1357 JADMLJ010000013.1 70635 Pasteurella multocida strain PMS 14 NODE_13_length_70635_cov_40.989725, whole genome shotgun sequence
1334 JADMLJ010000014.1 64238 Pasteurella multocida strain PMS 14 NODE_14_length_64238_cov_44.915715, whole genome shotgun sequence
1288 JADMLJ010000015.1 59752 Pasteurella multocida strain PMS 14 NODE_15_length_59752_cov_45.442851, whole genome shotgun sequence
1362 JADMLJ010000016.1 58003 Pasteurella multocida strain PMS 14 NODE_16_length_58003_cov_44.290464, whole genome shotgun sequence
1312 JADMLJ010000017.1 53704 Pasteurella multocida strain PMS 14 NODE_17_length_53704_cov_47.487460, whole genome shotgun sequence
1321 JADMLJ010000018.1 53423 Pasteurella multocida strain PMS 14 NODE_18_length_53423_cov_44.306459, whole genome shotgun sequence
1346 JADMLJ010000019.1 49846 Pasteurella multocida strain PMS 14 NODE_19_length_49846_cov_39.711659, whole genome shotgun sequence
1313 JADMLJ010000020.1 49316 Pasteurella multocida strain PMS 14 NODE_20_length_49316_cov_46.934181, whole genome shotgun sequence
1337 JADMLJ010000021.1 46596 Pasteurella multocida strain PMS 14 NODE_21_length_46596_cov_49.613271, whole genome shotgun sequence
1302 JADMLJ010000022.1 43948 Pasteurella multocida strain PMS 14 NODE_22_length_43948_cov_48.248057, whole genome shotgun sequence
1322 JADMLJ010000023.1 41717 Pasteurella multocida strain PMS 14 NODE_23_length_41717_cov_46.666322, whole genome shotgun sequence
1347 JADMLJ010000024.1 39408 Pasteurella multocida strain PMS 14 NODE_24_length_39408_cov_40.299392, whole genome shotgun sequence
1316 JADMLJ010000025.1 36613 Pasteurella multocida strain PMS 14 NODE_25_length_36613_cov_49.016421, whole genome shotgun sequence
1332 JADMLJ010000026.1 34676 Pasteurella multocida strain PMS 14 NODE_26_length_34676_cov_49.821797, whole genome shotgun sequence
1361 JADMLJ010000027.1 32810 Pasteurella multocida strain PMS 14 NODE_27_length_32810_cov_39.951978, whole genome shotgun sequence
1358 JADMLJ010000028.1 32631 Pasteurella multocida strain PMS 14 NODE_28_length_32631_cov_48.470174, whole genome shotgun sequence
1340 JADMLJ010000029.1 28610 Pasteurella multocida strain PMS 14 NODE_29_length_28610_cov_45.781426, whole genome shotgun sequence
1353 JADMLJ010000030.1 28493 Pasteurella multocida strain PMS 14 NODE_30_length_28493_cov_85.830002, whole genome shotgun sequence
1356 JADMLJ010000031.1 28058 Pasteurella multocida strain PMS 14 NODE_31_length_28058_cov_44.549119, whole genome shotgun sequence
1323 JADMLJ010000032.1 27542 Pasteurella multocida strain PMS 14 NODE_32_length_27542_cov_44.584702, whole genome shotgun sequence
1296 JADMLJ010000033.1 25989 Pasteurella multocida strain PMS 14 NODE_33_length_25989_cov_40.490970, whole genome shotgun sequence
1350 JADMLJ010000034.1 24516 Pasteurella multocida strain PMS 14 NODE_34_length_24516_cov_47.290659, whole genome shotgun sequence
1363 JADMLJ010000035.1 21365 Pasteurella multocida strain PMS 14 NODE_35_length_21365_cov_41.272287, whole genome shotgun sequence
1326 JADMLJ010000036.1 14544 Pasteurella multocida strain PMS 14 NODE_36_length_14544_cov_49.263874, whole genome shotgun sequence
1367 JADMLJ010000037.1 12245 Pasteurella multocida strain PMS 14 NODE_37_length_12245_cov_50.980772, whole genome shotgun sequence
1342 JADMLJ010000038.1 11825 Pasteurella multocida strain PMS 14 NODE_38_length_11825_cov_47.059404, whole genome shotgun sequence
1289 JADMLJ010000039.1 10240 Pasteurella multocida strain PMS 14 NODE_39_length_10240_cov_42.661584, whole genome shotgun sequence
1311 JADMLJ010000040.1 9214 Pasteurella multocida strain PMS 14 NODE_40_length_9214_cov_44.467557, whole genome shotgun sequence
1352 JADMLJ010000041.1 8179 Pasteurella multocida strain PMS 14 NODE_41_length_8179_cov_48.170039, whole genome shotgun sequence
1341 JADMLJ010000042.1 8025 Pasteurella multocida strain PMS 14 NODE_42_length_8025_cov_40.108176, whole genome shotgun sequence
1291 JADMLJ010000043.1 6437 Pasteurella multocida strain PMS 14 NODE_43_length_6437_cov_48.894058, whole genome shotgun sequence
1345 JADMLJ010000044.1 6402 Pasteurella multocida strain PMS 14 NODE_44_length_6402_cov_84.700964, whole genome shotgun sequence
1293 JADMLJ010000045.1 6225 Pasteurella multocida strain PMS 14 NODE_45_length_6225_cov_39.631382, whole genome shotgun sequence
1297 JADMLJ010000046.1 5247 Pasteurella multocida strain PMS 14 NODE_46_length_5247_cov_235.158353, whole genome shotgun sequence
1317 JADMLJ010000047.1 4279 Pasteurella multocida strain PMS 14 NODE_47_length_4279_cov_52.264272, whole genome shotgun sequence
1344 JADMLJ010000048.1 4125 Pasteurella multocida strain PMS 14 NODE_48_length_4125_cov_73.585185, whole genome shotgun sequence
1294 JADMLJ010000049.1 4084 Pasteurella multocida strain PMS 14 NODE_49_length_4084_cov_52.260165, whole genome shotgun sequence
1315 JADMLJ010000050.1 3920 Pasteurella multocida strain PMS 14 NODE_50_length_3920_cov_48.149025, whole genome shotgun sequence
1360 JADMLJ010000051.1 2826 Pasteurella multocida strain PMS 14 NODE_51_length_2826_cov_115.396947, whole genome shotgun sequence
1301 JADMLJ010000052.1 2637 Pasteurella multocida strain PMS 14 NODE_52_length_2637_cov_109.021077, whole genome shotgun sequence
1359 JADMLJ010000053.1 2502 Pasteurella multocida strain PMS 14 NODE_53_length_2502_cov_88.351875, whole genome shotgun sequence
1333 JADMLJ010000054.1 2397 Pasteurella multocida strain PMS 14 NODE_54_length_2397_cov_40.332903, whole genome shotgun sequence
1295 JADMLJ010000055.1 2330 Pasteurella multocida strain PMS 14 NODE_55_length_2330_cov_44.215521, whole genome shotgun sequence
1348 JADMLJ010000056.1 2162 Pasteurella multocida strain PMS 14 NODE_56_length_2162_cov_127.735506, whole genome shotgun sequence
1335 JADMLJ010000057.1 2128 Pasteurella multocida strain PMS 14 NODE_57_length_2128_cov_89.505114, whole genome shotgun sequence
1308 JADMLJ010000058.1 2034 Pasteurella multocida strain PMS 14 NODE_58_length_2034_cov_136.373660, whole genome shotgun sequence
1366 JADMLJ010000059.1 1946 Pasteurella multocida strain PMS 14 NODE_59_length_1946_cov_60.622662, whole genome shotgun sequence
1310 JADMLJ010000060.1 1926 Pasteurella multocida strain PMS 14 NODE_60_length_1926_cov_43.199352, whole genome shotgun sequence
1329 JADMLJ010000061.1 1839 Pasteurella multocida strain PMS 14 NODE_61_length_1839_cov_96.250000, whole genome shotgun sequence
1324 JADMLJ010000062.1 1835 Pasteurella multocida strain PMS 14 NODE_62_length_1835_cov_67.185227, whole genome shotgun sequence
1290 JADMLJ010000063.1 1805 Pasteurella multocida strain PMS 14 NODE_63_length_1805_cov_131.839884, whole genome shotgun sequence
1319 JADMLJ010000064.1 1711 Pasteurella multocida strain PMS 14 NODE_64_length_1711_cov_71.037897, whole genome shotgun sequence
1325 JADMLJ010000065.1 1687 Pasteurella multocida strain PMS 14 NODE_65_length_1687_cov_1.428660, whole genome shotgun sequence
1307 JADMLJ010000066.1 1671 Pasteurella multocida strain PMS 14 NODE_66_length_1671_cov_43.197995, whole genome shotgun sequence
1305 JADMLJ010000067.1 1668 Pasteurella multocida strain PMS 14 NODE_67_length_1668_cov_132.905210, whole genome shotgun sequence
1331 JADMLJ010000068.1 1507 Pasteurella multocida strain PMS 14 NODE_68_length_1507_cov_49.034916, whole genome shotgun sequence
1300 JADMLJ010000069.1 1378 Pasteurella multocida strain PMS 14 NODE_69_length_1378_cov_85.954720, whole genome shotgun sequence
1365 JADMLJ010000070.1 1349 Pasteurella multocida strain PMS 14 NODE_70_length_1349_cov_142.293564, whole genome shotgun sequence
1309 JADMLJ010000071.1 1334 Pasteurella multocida strain PMS 14 NODE_71_length_1334_cov_86.485306, whole genome shotgun sequence
1306 JADMLJ010000072.1 1236 Pasteurella multocida strain PMS 14 NODE_72_length_1236_cov_94.413437, whole genome shotgun sequence
1349 JADMLJ010000073.1 1182 Pasteurella multocida strain PMS 14 NODE_73_length_1182_cov_129.118338, whole genome shotgun sequence
1292 JADMLJ010000074.1 1175 Pasteurella multocida strain PMS 14 NODE_74_length_1175_cov_91.477273, whole genome shotgun sequence
1336 JADMLJ010000075.1 1172 Pasteurella multocida strain PMS 14 NODE_75_length_1172_cov_94.100273, whole genome shotgun sequence
1364 JADMLJ010000076.1 1147 Pasteurella multocida strain PMS 14 NODE_76_length_1147_cov_48.217351, whole genome shotgun sequence
1304 JADMLJ010000077.1 1139 Pasteurella multocida strain PMS 14 NODE_77_length_1139_cov_127.241541, whole genome shotgun sequence
1355 JADMLJ010000078.1 1128 Pasteurella multocida strain PMS 14 NODE_78_length_1128_cov_139.105413, whole genome shotgun sequence
1339 JADMLJ010000079.1 1080 Pasteurella multocida strain PMS 14 NODE_79_length_1080_cov_141.469652, whole genome shotgun sequence
1338 JADMLJ010000080.1 1044 Pasteurella multocida strain PMS 14 NODE_80_length_1044_cov_134.800826, whole genome shotgun sequence