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Pasteurella multocida isolates

Missing metadata are labelled N for text and 0 for integers

Updated 1 April 2022

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Sequence bin for 92_2667

Contig summary statistics

Contigs
20
Total length
2,215,551
Minimum length
1,002
Maximum length
516,121
Mean length
110,778
N50 contig number
3
N50 length (L50)
210,819
N90 contig number
11
N90 length (L90)
84,391
N95 contig number
12
N95 length (L95)
74,956

Contig size distribution

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionEMBL formatArtemis
1182JABCJP010000139.1516121Pasteurella multocida strain 92_2667 Contig_141, whole genome shotgun sequencecapA 143286146204 ←
1179 JABCJP010000138.1 392684 Pasteurella multocida strain 92_2667 Contig_140, whole genome shotgun sequence
1181 JABCJP010000002.1 210819 Pasteurella multocida strain 92_2667 Contig_2, whole genome shotgun sequence
1172 JABCJP010000134.1 153457 Pasteurella multocida strain 92_2667 Contig_136, whole genome shotgun sequence
1184 JABCJP010000107.1 149356 Pasteurella multocida strain 92_2667 Contig_109, whole genome shotgun sequence
1169JABCJP010000087.1117510Pasteurella multocida strain 92_2667 Contig_89, whole genome shotgun sequenceLPSgroup 3 9016091002 →
1177 JABCJP010000084.1 110203 Pasteurella multocida strain 92_2667 Contig_86, whole genome shotgun sequence
1186 JABCJP010000147.1 107638 Pasteurella multocida strain 92_2667 Contig_149, whole genome shotgun sequence
1176 JABCJP010000119.1 96998 Pasteurella multocida strain 92_2667 Contig_121, whole genome shotgun sequence
1175 JABCJP010000068.1 94275 Pasteurella multocida strain 92_2667 Contig_69, whole genome shotgun sequence
1171 JABCJP010000013.1 84391 Pasteurella multocida strain 92_2667 Contig_13, whole genome shotgun sequence
1187 JABCJP010000114.1 74956 Pasteurella multocida strain 92_2667 Contig_116, whole genome shotgun sequence
1174 JABCJP010000020.1 54958 Pasteurella multocida strain 92_2667 Contig_20, whole genome shotgun sequence
1180 JABCJP010000025.1 24582 Pasteurella multocida strain 92_2667 Contig_25, whole genome shotgun sequence
1185 JABCJP010000115.1 17033 Pasteurella multocida strain 92_2667 Contig_117, whole genome shotgun sequence
1183 JABCJP010000007.1 3459 Pasteurella multocida strain 92_2667 Contig_7, whole genome shotgun sequence
1173 JABCJP010000069.1 3114 Pasteurella multocida strain 92_2667 Contig_70, whole genome shotgun sequence
1168 JABCJP010000116.1 1759 Pasteurella multocida strain 92_2667 Contig_118, whole genome shotgun sequence
1178 JABCJP010000088.1 1236 Pasteurella multocida strain 92_2667 Contig_90, whole genome shotgun sequence
1170 JABCJP010000130.1 1002 Pasteurella multocida strain 92_2667 Contig_132, whole genome shotgun sequence