Pasteurella multocida isolates

Missing metadata are labelled N for text and 0 for integers

Updated 1 April 2022

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Full information on isolate UBA9365 (id:97)

Provenance/meta data

id
97
isolate
UBA9365
sender
Henrik Christensen
curator
Henrik Christensen, (E-mail: hech@sund.ku.dk)
update history
4 updates show details
date entered
2021-11-28
datestamp
2022-03-24
year
0
host
N
lesion
N
country
N
organ
N
ST
393

Sequence bin

contigs
55
total length
2,158,847 bp
max length
189,840 bp
mean length
39,252 bp
N50 contig number
12
N50 length (L50)
59,972
N90 contig number
33
N90 length (L90)
22,008
N95 contig number
40
N95 length (L95)
13,307
loci tagged
2
detailed breakdown
Display

Schemes and loci

CAP

capA
33  S 
capB
 
capD
 
capE
 
capF
 
CAP
Not defined

LPS_group

LPSgroup 1
 
LPSgroup 2
 
LPSgroup 3
16  S 
LPSgroup 4
 
LPSgroup 5
 
LPSgroup 6
 
LPSgroup 7
 
LPSgroup 8
 
LPS group
Not defined

Tools

Analysis: