Pasteurella multocida isolates

Missing metadata are labelled N for text and 0 for integers

Updated 1 April 2022

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Full information on isolate B (id:92)

Provenance/meta data

id
92
isolate
B
sender
Henrik Christensen
curator
Henrik Christensen, (E-mail: hech@sund.ku.dk)
update history
5 updates show details
date entered
2021-11-25
datestamp
2022-03-24
year
2013
host
Bovine
lesion
N
country
China
organ
N
ST
122

Sequence bin

contigs
32
total length
2,311,006 bp
max length
597,846 bp
mean length
72,219 bp
N50 contig number
4
N50 length (L50)
172,175
N90 contig number
13
N90 length (L90)
44,804
N95 contig number
17
N95 length (L95)
17,909
loci tagged
1
detailed breakdown
Display

Schemes and loci

CAP

capA
 
capB
1
capD
 
capE
 
capF
 
CAP
Not defined

LPS_group

LPSgroup 1
 
LPSgroup 2
4  S 
LPSgroup 3
 
LPSgroup 4
 
LPSgroup 5
 
LPSgroup 6
 
LPSgroup 7
 
LPSgroup 8
 
LPS group
Not defined

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Analysis: