Pasteurella multocida isolates

Missing metadata are labelled N for text and 0 for integers

Updated 1 April 2022

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Full information on isolate PMUVET4 (id:91)

Provenance/meta data

id
91
isolate
PMUVET4
sender
Henrik Christensen
curator
Henrik Christensen, (E-mail: hech@sund.ku.dk)
update history
5 updates show details
date entered
2021-11-25
datestamp
2022-03-24
year
2007
host
Alpaca
lesion
N
country
Peru
organ
N
ST
321

Sequence bin

contigs
87
total length
2,423,458 bp
max length
263,623 bp
mean length
27,856 bp
N50 contig number
10
N50 length (L50)
70,050
N90 contig number
40
N90 length (L90)
14,572
N95 contig number
52
N95 length (L95)
7,302
loci tagged
1
detailed breakdown
Display

Schemes and loci

CAP

capA
5
capB
 
capD
 
capE
 
capF
 
CAP
Not defined

LPS_group

LPSgroup 1
 
LPSgroup 2
 
LPSgroup 3
 
LPSgroup 4
 
LPSgroup 5
 
LPSgroup 6
16  S 
LPSgroup 7
 
LPSgroup 8
 
LPS group
Not defined

Tools

Analysis: