Pasteurella multocida isolates

Missing metadata are labelled N for text and 0 for integers

Updated 1 April 2022

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Full information on isolate 92_2667 (id:87)

Provenance/meta data

id
87
isolate
92_2667
sender
Henrik Christensen
curator
Henrik Christensen, (E-mail: hech@sund.ku.dk)
update history
4 updates show details
date entered
2021-11-21
datestamp
2022-03-24
year
1992
host
Chicken
lesion
N
country
USA
organ
N
ST
143

Sequence bin

contigs
20
total length
2,215,551 bp
max length
516,121 bp
mean length
110,778 bp
N50 contig number
3
N50 length (L50)
210,819
N90 contig number
11
N90 length (L90)
84,391
N95 contig number
12
N95 length (L95)
74,956
loci tagged
2
detailed breakdown
Display

Schemes and loci

CAP

capA
1  S 
capB
 
capD
 
capE
 
capF
 
CAP
Not defined

LPS_group

LPSgroup 1
 
LPSgroup 2
 
LPSgroup 3
14  S 
LPSgroup 4
 
LPSgroup 5
 
LPSgroup 6
 
LPSgroup 7
 
LPSgroup 8
 
LPS group
Not defined

Tools

Analysis: