Pasteurella multocida isolates

Missing metadata are labelled N for text and 0 for integers

Updated 1 April 2022

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Full information on isolate P1234 (id:6)

Provenance/meta data

id
6
isolate
P1234
sender
Henrik Christensen
curator
Henrik Christensen, (E-mail: hech@sund.ku.dk)
update history
6 updates show details
date entered
2021-09-27
datestamp
2022-03-29
year
0
host
Zebu cattl
lesion
N
country
Cameroon
organ
N
ST
292

Sequence bin

contigs
31
total length
2,235,911 bp
max length
385,083 bp
mean length
72,127 bp
N50 contig number
5
N50 length (L50)
121,978
N90 contig number
16
N90 length (L90)
47,139
N95 contig number
19
N95 length (L95)
30,585
loci tagged
0
detailed breakdown
Display

Schemes and loci

CAP

capA
 
capB
 
capD
 
capE
1
capF
 
CAP
Not defined

LPS_group

LPSgroup 1
 
LPSgroup 2
2
LPSgroup 3
 
LPSgroup 4
 
LPSgroup 5
 
LPSgroup 6
 
LPSgroup 7
 
LPSgroup 8
 
LPS group
Not defined

Tools

Analysis: