Pasteurella multocida isolates

Missing metadata are labelled N for text and 0 for integers

Updated 1 April 2022

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Full information on isolate M1404 (id:25)

Provenance/meta data

id
25
isolate
M1404
sender
Henrik Christensen
curator
Henrik Christensen, (E-mail: hech@sund.ku.dk)
update history
1 update show details
date entered
2022-03-28
datestamp
2022-03-28
year
1922
host
Bison
lesion
N
country
USA
organ
N
ST
122

Sequence bin

contigs
24
total length
2,254,958 bp
max length
595,546 bp
mean length
93,957 bp
N50 contig number
3
N50 length (L50)
177,964
N90 contig number
12
N90 length (L90)
55,696
N95 contig number
14
N95 length (L95)
28,122
loci tagged
0
detailed breakdown
Display

Schemes and loci

CAP

capA
 
capB
1
capD
 
capE
 
capF
 
CAP
Not defined

LPS_group

LPSgroup 1
 
LPSgroup 2
2
LPSgroup 3
 
LPSgroup 4
 
LPSgroup 5
 
LPSgroup 6
 
LPSgroup 7
 
LPSgroup 8
 
LPS group
Not defined

Tools

Analysis: